Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849535.1_cds_XP_016510813.1_23614
CDS Infomation

[gene=LOC107828078] [db_xref=GeneID:107828078] [protein=probable xyloglucan 6-xylosyltransferase 3] [protein_id=XP_016510813.1] [location=22515..23882] [gbkey=CDS]
Sequence

ATGGGCCAAGAAAGCACATTCACAGCCCAGAAACGCGCCGGTGCACTCCCTGTAACAACC
ACCACCGCCAACGGCGGCGTCCGCAGCCGCTCCGCCACCAATTCTTCCGCCTTACCACGC
GGCCGTCAGATCCAACGTACATTCAACAACGTCAAAATCACCATCCTCTGCGGCTTCGTC
ACTATCCTCGTCCTACGTGGTACCATCGGCATTGGCAACCTCTCATCCTCCGACGCCGAC
GCTGAGACTCAGAATCTCATAGAAGAAACTAATCGGATCCTCGCCGAAATGCGATCCGAT
AAGGACCCGGACGACCCGGTTGATCAACCCGAGACTTTCATGAGCCTGAATGAGACTTAT
AGTTTAGGTCCGAAGATTGTTAATTGGGATAAAGACCGGAAAATGTGGCTCGAGAAGAAT
CCAGAATTTCCGAATTTGGTTAATGGTAAGCCTCGGATTTTACTTGTAACTGGTTCTCCT
CCAAATCCTTGTGATAATGCAATTGGAGATCATTATTTGTTGAAGGCAATAAAGAACAAG
ATTGATTATTGTCGGATTCATGGTATTGAAATTCTGTATAATTTAGCTCATTTGGATAAG
GAAATGGCTGGTTATTGGTCCAAACTGCCATTGATTCGTAGGCTAATGTTATCTCACCCT
GAAGTAGAATGGATTTGGTGGATGGACAGTGATGCATTGTTTACTGATATGGTTTTGGAG
ATCCCTTTATCCAAGTATAATCGTCATAATCTTGTTATTCACGGGTACCCGGATTTGTTG
TTTGATCAGAAATCATGGATTGCAGTGAACACCGGTAGTTTTCTCTTTAGGAATTGCCAG
TGGTCTCTTGATTTGTTGGATGCTTGGGCACCGATGGGACCTAAAGGTCCTATTCGAGAT
GAAGCTGGGAAGATTTTGACGGCTAATTTAAAGGATAGACCAGCATTTGAAGCGGATGAT
CAGTCTGCGCTAATATACTTGTTCGTATCACAGAAGGATAAATGGATGCAGAAGGTGTTT
GTTGAGAATTCGTATTATCTACACGGATATTGGGCGGGGCTAGTTGATAGGTATGAAGAG
ATGATTGAGAAGTACCATCCCGGTTTAGGCGATGAGAGATGGCCATTTGTTACTCATTTT
GTAGGATGCAAGCCTTGTGGGAGTTATGGAGATTACCCTGTTGAGAGGTGCTTGAAAAGC
ATGGAGAGGGCTTTCAATTTTGCAGATAATCAAGTGCTTAACTTATACGGGTTTAGGCAT
AAAGGATTGTTGAGTCCTAACATCAAAAGGATTAGGAATGAATCTGATCACCCGCTGCAG
TACGTAGATCAGTTAGATGTTCGACATGCAAAGCACAAGAGCACATGA

Peptide Sequence

PEP ID

XP_016510813.1
PEP Infomation

PREDICTED: probable xyloglucan 6-xylosyltransferase 3 [Nicotiana tabacum]
Sequence

MGQESTFTAQKRAGALPVTTTTANGGVRSRSATNSSALPRGRQIQRTFNNVKITILCGFV
TILVLRGTIGIGNLSSSDADAETQNLIEETNRILAEMRSDKDPDDPVDQPETFMSLNETY
SLGPKIVNWDKDRKMWLEKNPEFPNLVNGKPRILLVTGSPPNPCDNAIGDHYLLKAIKNK
IDYCRIHGIEILYNLAHLDKEMAGYWSKLPLIRRLMLSHPEVEWIWWMDSDALFTDMVLE
IPLSKYNRHNLVIHGYPDLLFDQKSWIAVNTGSFLFRNCQWSLDLLDAWAPMGPKGPIRD
EAGKILTANLKDRPAFEADDQSALIYLFVSQKDKWMQKVFVENSYYLHGYWAGLVDRYEE
MIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQVLNLYGFRH
KGLLSPNIKRIRNESDHPLQYVDQLDVRHAKHKST

Transcript Sequence

Gene sequence data has not been registered.